Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932427.1_cds_XP_016478954.1_70548
CDS Infomation

[gene=LOC107800313] [db_xref=GeneID:107800313] [protein=LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.5 isoform X2] [protein_id=XP_016478954.1] [location=complement(join(56460..57601,58104..58124,58240..58272,58419..58496,58593..59439))] [gbkey=CDS]
Sequence

ATGTCTGGAGGAACCAAATTTCTTTCAGTTCTTACGATTCTCATCTTCTTGCAGCTCTCT
GACACCCCATTTGCCAAACAGAACCAGCGTTGTGCACCTTCTAGTTGTGGGCATATTAAG
AACATCAGCTACCCCTTTCGATTGAAAACTGATCCAAAGCACTGTGGCGACGAAAAATAT
GAATTAAGCTGCAAAGGAAATCGCACCATATTAACGATATTTACATTTTTAGATTCTCTG
AACGCCACATATTCATGGAACGCTGTAGATTCTCTGAACTACTATGTGCAAGCCATCAAT
TATGATAACTCCACTATCCGCCTTGTAGATCCTGGGATAAGAGAACAAGTTGTTTGCTCT
CTTCCTCAGCATTCAATTACAGATTACACGTTTTTCACTCCCTCTTTTCAATATGATTTT
TTTAAAAGTGATGGTTCTGATGCTCCTTTAGCTGTGAAAATCGCTATTTTCAGCTGTCCA
TTTGCCATGAATTCTCCCGCCTTTGTGGAAATCACTAATTGTCTCAACAGGAGTGACGCT
TCCAATGTTTCTTCCAAGGGACACACGTATGCAGCTACGGGAAACCTATATTCATCTGAT
TTGGGAGTGGGGTGTAGTGTAAACCTCATGTCACTGACTTCATGGCCTACTATTGATGAT
GCAAATGTTTCAATCTTAGAGCTTCATAATGCTTTGGCATATGGGTTTGAACTTTCATGG
TTTGGTGACATTTACTGTAACAAGTGCCGCAATATATATGACTGCGTAGGTGAAAATTCA
AGGAATGTTCGCTGTCTGGAGATCAACTGCAAAGATTACAATTTTAGATTCTTCAAGGTG
CATACTTGTGAAAATTCAAGGGATGTTCGTTGTGAGGATTACACCTGCAAGGTTTACAAT
TTTGAATTCTTCAAAACCTTATGTGGTCATAAAAGACATGTTCTCAGTGTTCTTATAAGA
ATCATCCCATGGATACTTGGAGATATCGTTGTGGCAAAAATCATACTATTCCCATGCATA
TTTGTGTTTCTAATGATTGAATTACGAAGAAGGCATTTGTCGATTTTTGATGCAATTGAA
AGTTTCCTGCATAGTGAGCATAATTTCATGCCTATTCAATACCCCTATTCCAACATAAGG
AAGATGACTAGGAATTTTAAGGAGAAAGTAGGCCAAGGAGGTTATGGTTCAGTATATAAA
GGCAAGCTCCGAAGTGGTCCTGATGTTGCAGTGAAGATCTTGACCAAGCCCAAAGCTGAT
GGGCAAGACTTCATCAACGAGGTTGCCACAATCGGAAGGATTCATCATGTTAACGTGGTA
CAACTTATTGGCTATTGTGCTGAGAGATCTAAACGTGCCCTCGTATATGACTTCATGCCT
AATGGATCACTTGACAAGTACATCACACCCCGAGAAGGAGGAACTCTACTTAGCTGGCAA
AGAAAGTCTGAAATTGCTCTTGGAGTTGCTCGAGGTATTGAATATTTGCATCGAGGTTGT
GACATACAAATTCTACATTTTGACATCAAGCCGCACAACATACTTTTGGATGAAAATTTC
GTTCCAAAAATTTCTGACTTTGGTCTTGCTAAATTATACCCCACGGATAACAGCATTGTT
ACTCTAACAGCAGCAAGGGGAACAATCGGATATGTAGCTCCAGAACTCATCAACAGAAGC
ATTGGTCCTATATCTTATAAGGCAGATGTTTATAGCTTTGGAATGTTACTGATTGAGATA
GCAGGTATGAAAGGAAACTCGGCAGCAAGAGAGGATATGTCAAGCCAGTATTTTCCACAT
TGGATCTATGATCAATTCGACAAGGAAAAGGAAATTGAAGTACTAGACGAGACGCATGAT
GATGAAATGATCATAAAGAAGCTAACTTTAGTTGCTTTGTGGTGCATACAAATGAATCCA
CTCGATCGTCCGTCAATGACTAAAGTAGTTGAAATGCTTGAAGGTGAATTACAGGCTTTG
CAAACGCCTCCTAGGCCTTTTGAATCACTGCAACCATCTCCGTTGGAATTCAATCTGAGT
TCTTCACTAGGTTCAACTGAGTCTATGATTTTGGTTGAGAATTGTTCTGATTCTGCAAAA
GTAGATGTAATTATAGGTTGA

Peptide Sequence

PEP ID

XP_016478954.1
PEP Infomation

PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.5 isoform X2 [Nicotiana tabacum]
Sequence

MSGGTKFLSVLTILIFLQLSDTPFAKQNQRCAPSSCGHIKNISYPFRLKTDPKHCGDEKY
ELSCKGNRTILTIFTFLDSLNATYSWNAVDSLNYYVQAINYDNSTIRLVDPGIREQVVCS
LPQHSITDYTFFTPSFQYDFFKSDGSDAPLAVKIAIFSCPFAMNSPAFVEITNCLNRSDA
SNVSSKGHTYAATGNLYSSDLGVGCSVNLMSLTSWPTIDDANVSILELHNALAYGFELSW
FGDIYCNKCRNIYDCVGENSRNVRCLEINCKDYNFRFFKVHTCENSRDVRCEDYTCKVYN
FEFFKTLCGHKRHVLSVLIRIIPWILGDIVVAKIILFPCIFVFLMIELRRRHLSIFDAIE
SFLHSEHNFMPIQYPYSNIRKMTRNFKEKVGQGGYGSVYKGKLRSGPDVAVKILTKPKAD
GQDFINEVATIGRIHHVNVVQLIGYCAERSKRALVYDFMPNGSLDKYITPREGGTLLSWQ
RKSEIALGVARGIEYLHRGCDIQILHFDIKPHNILLDENFVPKISDFGLAKLYPTDNSIV
TLTAARGTIGYVAPELINRSIGPISYKADVYSFGMLLIEIAGMKGNSAAREDMSSQYFPH
WIYDQFDKEKEIEVLDETHDDEMIIKKLTLVALWCIQMNPLDRPSMTKVVEMLEGELQAL
QTPPRPFESLQPSPLEFNLSSSLGSTESMILVENCSDSAKVDVIIG

Transcript Sequence

Gene sequence data has not been registered.